Items where Author is "Yang, Andrian"

Ma, Shichao and Fang, Xiunan and Yao, Yu and Li, Jianfu and Morgan, Daniel C. and Xia, Yongyan and Kwok, Crystal S.M. and Lo, Michelle C.K. and Siu, Dickson M.D. and Tsia, Kevin K. and Yang, Andrian and Ho, Joshua W.K. (2023) StarmapVis: An interactive and narrative visualisation tool for single-cell and spatial data. Computational and Structural Biotechnology Journal, 21. pp.1598-1605. ISSN 20010370

Yang, Andrian and Alankarage, Dimuthu and Cuny, Hartmut and Ip, Eddie K.K. and Almog, Moran and Lu, Jessica and Das, Debjani and Enriquez, Annabelle and Szot, Justin O. and Humphreys, David T. and Blue, Gillian M. and Ho, Joshua W.K. and Winlaw, David S. and Dunwoodie, Sally L. and Giannoulatou, Eleni (2022) CHDgene: A Curated Database for Congenital Heart Disease Genes. Circulation: Genomic and Precision Medicine, 15 (3). ISSN 2574-8300

Ayer, Anita and Fazakerley, Daniel J. and Suarna, Cacang and Maghzal, Ghassan J. and Sheipouri, Diba and Lee, Kevin J. and Bradley, Michelle C. and Fernández-del-Rio, Lucía and Tumanov, Sergey and Kong, Stephanie MY. and van der Veen, Jelske N. and Yang, Andrian and Ho, Joshua W.K. and Clarke, Steven G. and James, David E. and Dawes, Ian W. and Vance, Dennis E. and Clarke, Catherine F. and Jacobs, René L. and Stocker, Roland (2021) Genetic screening reveals phospholipid metabolism as a key regulator of the biosynthesis of the redox-active lipid coenzyme Q. Redox Biology, 46. p. 102127. ISSN 22132317

Yang, Andrian (2019) Cloud based computing technologies for genomic medicine. PhD thesis, Victor Chang Cardiac Research Institute & St Vincent's Clinical School, Faculty of Medicine, UNSW.

Yang, Andrian and Kishore, Abhinav and Phipps, Benjamin and Ho, Joshua W. K. (2019) Cloud accelerated alignment and assembly of full-length single-cell RNA-seq data using Falco. BMC Genomics, 20 (S10). ISSN 1471-2164

Le, Thi Yen Loan and Pickett, Hilda A. and Yang, Andrian and Ho, Joshua W. K. and Thavapalachandran, Sujitha and Igoor, Sindhu and Yang, Sile F. and Farraha, Melad and Voges, Holly K. and Hudson, James E. and dos Remedios, Cristobal G. and Bryan, Tracy M. and Kizana, Eddy and Chong, James J. H. (2019) Enhanced cardiac repair by telomerase reverse transcriptase over-expression in human cardiac mesenchymal stromal cells. Scientific Reports, 9 (1). ISSN 2045-2322

Murphy, Patricia and Kabir, Md Humayun and Srivastava, Tarini and Mason, Michele E. and Dewi, Chitra U. and Lim, Seakcheng and Yang, Andrian and Djordjevic, Djordje and Killingsworth, Murray C and Ho, Joshua W K and Harman, David G and O'Connor, Michael D (2018) Light-focusing human micro-lenses generated from pluripotent stem cells model lens development and drug-induced cataract in vitro. Development, 145 (1). pp.1-12. ISSN 0950-1991 (OA)

Kakrana, Atul and Yang, Andrian and Anand, Deepti and Djordjevic, Djordje and Ramachandruni, Deepti and Singh, Abhyudai and Huang, Hongzhan and Ho, Joshua W K and Lachke, Salil A (2018) iSyTE 2.0: a database for expression-based gene discovery in the eye. Nucleic Acids Research, 46. pp. D875-D885. ISSN 0305-1048 (OA)

Yang, Andrian and Troup, Michael and Ho, Joshua W K (2017) Scalability and Validation of Big Data Bioinformatics Software. Computational and Structural Biotechnology Journal, 15. pp.379-386. ISSN 2001-0370 (PMC OA)

Yang, Pengyi and Oldfield, Andrew and Kim, Taiyun and Yang, Andrian and Yee Hwa Yang, Jean and Ho, Joshua W K (2017) Integrative analysis identifies co-dependent gene expression regulation of BRG1 and CHD7 at distal regulatory sites in embryonic stem cells. Bioinformatics, 33 (13). pp.1916-1920. ISSN 1367-4811 (PP OA)

Szot, Peter S and Yang, Andrian and Wang, Xin and Parsania, Chirag and Röhm, Uwe and Wong, Koon Ho and Ho, Joshua W K (2017) PBrowse: a web-based platform for real-time collaborative exploration of genomic data. Nucleic Acids Research, 45 (9). pp. e67. ISSN 1362-4962 (OA)

Yang, Andrian and Troup, Michael and Lin, Peijie and Ho, Joshua W K (2017) Falco: a quick and flexible single-cell RNA-seq processing framework on the cloud. Bioinformatics, 33 (5). pp.767-769. ISSN 1367-4811 (PP OA)

Troup, Michael and Yang, Andrian and Kamali, Amir Hossein and Giannoulatou, Eleni and Chen, Tsong Yueh and Ho, Joshua W K (2016) A cloud-based framework for applying metamorphic testing to a bioinformatics pipeline. Proceedings of the First International Workshop on Metamorphic Testing (PP OA). pp.33-36.

Giannoulatou, Eleni and Kamali, Amir Hossein and Yang, Andrian and Chen, Tsong Yueh and Ho, Joshua W K (2016) Quality assurance in genome-scale bioinformatics analyses (Book Chapter). Computational Biology & Bioinformatics: Gene Regulation, BOOK. ISSN 9781498724975 - CAT# K25752 (Book Chapter)

Djordjevic, Djordje and Deshpande, Vinita and Szczesnik, Tomasz and Yang, Andrian and Humphreys, David T and Giannoulatou, Eleni and Ho, Joshua W K (2015) Decoding the complex genetic causes of heart diseases using systems biology. Biophys Rev, 7. pp.141-159. ISSN (PP OA)

Djordjevic, Djordje and Yang, Andrian and Zadoorian, Armella and Rungrugeecharoen, Kevin and Ho, Joshua W K (2014) How difficult is inference of mammalian causal gene regulatory networks? PloS One, 9 (11). pp. e111661. ISSN 1932-6203 (OA)